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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8X7_PETMAUncharacterized protein. (159 aa)    
Predicted Functional Partners:
S4RQR5_PETMA
Fibronectin type-III domain-containing protein.
 
     0.949
S4RS15_PETMA
Uncharacterized protein.
 
      0.900
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
     
 0.816
S4RW47_PETMA
Insulin-like growth factor binding protein 5b.
    
 0.643
S4RC78_PETMA
NTR domain-containing protein.
    
 0.641
TIMP1
TIMP metallopeptidase inhibitor 1.
    
 0.641
S4RY75_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.463
S4RNQ2_PETMA
Link domain-containing protein.
    
 0.452
S4REC5_PETMA
Uncharacterized protein.
    
 0.448
S4REP7_PETMA
LAM_G_DOMAIN domain-containing protein.
    
 0.448
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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