Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLF10Uncharacterized protein. (469 aa)    
Predicted Functional Partners:
S4R8K9_PETMA
HDAC_interact domain-containing protein.
    
 
 0.868
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 0.692
S4RTM7_PETMA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.664
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.583
S4RGV3_PETMA
BZIP domain-containing protein.
   
 
 0.577
S4RJD8_PETMA
LIM domain only 2 (rhombotin-like 1).
    
 
 0.549
S4R848_PETMA
Uncharacterized protein.
    
  0.548
S4RZS0_PETMA
Transforming growth factor beta regulator 1.
    
 0.542
S4RSE0_PETMA
HMG box domain-containing protein.
    
 
 0.520
S4RQD6_PETMA
GATA binding protein 3.
    
 0.513
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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