Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8Z6_PETMAC1q domain-containing protein. (247 aa)    
Predicted Functional Partners:
ADIPOQ-3
Adiponectin, C1Q and collagen domain containing.
  
 
 
0.911
ADIPOQ
Adiponectin, C1Q and collagen domain containing.
     
 
0.900
S4RBG2_PETMA
Adiponectin receptor 1b.
     
 0.900
S4RKM5_PETMA
Adiponectin receptor 2.
     
 0.900
S4RLF8_PETMA
Pre-mRNA processing factor 8.
      
 0.621
S4RDS2_PETMA
Coiled-coil-helix-coiled-coil-helix domain containing 10.
      
 0.615
S4RHM7_PETMA
Fork-head domain-containing protein.
      
 0.610
S4RW96_PETMA
THF_DHG_CYH_C domain-containing protein.
      
 0.592
S4RYF9_PETMA
Uncharacterized protein.
      
 0.592
S4RQU7_PETMA
Thymidylate synthetase.
      
 0.561
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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