Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R8Z7_PETMADopachrome tautomerase. (235 aa)    
Predicted Functional Partners:
S4R4N6_PETMA
Solute carrier family 45 member 2.
    
 
 0.933
S4R4H4_PETMA
Solute carrier family 24 member 6a; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.855
S4RQD9_PETMA
Uncharacterized protein.
      
 0.837
S4R5C5_PETMA
Uncharacterized protein.
      
 0.808
S4RCE1_PETMA
Uncharacterized protein.
    
 0.777
S4RTD2_PETMA
Survival motor neuron domain containing 1.
      
 0.746
S4RBF4_PETMA
Fork-head domain-containing protein.
    
 0.743
S4R9K5_PETMA
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
      
 0.727
GPNMB
Glycoprotein nmb.
      
 0.716
S4RJL8_PETMA
Melanocyte inducing transcription factor a.
    
 
 0.715
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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