STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Polycomb group ring finger 3. (118 aa)    
Predicted Functional Partners:
DCAF7
Ddb1 and cul4 associated factor 7.
    
  0.915
S4RR64_PETMA
Uncharacterized protein.
   
 0.901
PCGF3-2
Polycomb group ring finger 3.
 
      0.900
S4RX93_PETMA
Polycomb group ring finger 5b.
    
 
 0.894
S4R9H5_PETMA
YY1 associated factor 2.
    
 0.887
S4RQE3_PETMA
YY1 associated factor 2.
    
 0.887
S4RQ11_PETMA
Bmi1 polycomb ring finger oncogene 1b.
  
 
0.869
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
    
 0.852
CSNK2A2-2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
    
 0.852
S4RSJ7_PETMA
Polycomb group ring finger 6.
  
 
0.821
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.