Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R905_PETMAUncharacterized protein. (803 aa)    
Predicted Functional Partners:
S4RY83_PETMA
Ribosomal protein S10.
 
  
   0.923
S4R9D8_PETMA
Uncharacterized protein.
 
      0.899
S4RC93_PETMA
Uncharacterized protein.
 
      0.899
S4RDP9_PETMA
S10_plectin domain-containing protein.
 
      0.899
S4RJQ3_PETMA
Uncharacterized protein.
 
      0.899
S4S1A5_PETMA
S10_plectin domain-containing protein.
 
      0.899
S4RY80_PETMA
Uncharacterized protein.
 
 
 
 0.851
S4R7J7_PETMA
Uncharacterized protein.
  
 0.698
S4RT87_PETMA
Uncharacterized protein.
 
      0.619
S4RHJ7_PETMA
Uncharacterized protein.
   
 0.605
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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