STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A2Amino acid transporter. (232 aa)    
Predicted Functional Partners:
SLC1A2-2
Amino acid transporter.
 
     0.931
S4RK46_PETMA
Amino acid transporter.
  
  
 
0.798
S4R6B8_PETMA
Solute carrier family 6 member 4b.
    
 0.737
S4RAT4_PETMA
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
 
 0.700
S4RUW5_PETMA
Uncharacterized protein.
  
 
 0.700
S4RKX5_PETMA
Solute carrier family 13 member 1.
    
 0.573
S4RZN0_PETMA
Solute carrier family 13 member 4.
    
 0.573
S4RXL8_PETMA
Aamy domain-containing protein.
  
 
 0.521
S4RM73_PETMA
Solute carrier family 3 member 1.
  
 
 0.496
S4REM5_PETMA
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
   
 
 0.477
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.