Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC1A2Amino acid transporter. (232 aa)    
Predicted Functional Partners:
SLC1A2-2
Amino acid transporter.
 
     0.930
S4R6J1_PETMA
Fibrinogen C-terminal domain-containing protein.
   
    0.779
S4RXL8_PETMA
Aamy domain-containing protein.
  
 
 0.720
S4RTF2_PETMA
Glutamine synthetase.
      
 0.654
S4RM73_PETMA
Solute carrier family 3 member 1.
  
 
 0.650
S4RUK4_PETMA
Solute carrier family 32 member 1.
   
  
 0.641
S4RKJ2_PETMA
Uncharacterized protein.
   
 
 0.635
S4RYJ4_PETMA
Solute carrier family 15 member 1b.
   
 
 0.586
RPL32
Ribosomal protein L32.
    
   0.560
SNAP25-2
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.559
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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