Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R910_PETMAUncharacterized protein; Belongs to the peptidase S1 family. (507 aa)    
Predicted Functional Partners:
S4RC06_PETMA
Small integral membrane protein 12.
    
 0.748
S4RHY0_PETMA
Leucine rich repeat containing 40.
    
 0.650
S4RTU1_PETMA
T cell activation inhibitor, mitochondrial.
      
 0.624
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.601
S4R699_PETMA
Small nuclear RNA activating complex, polypeptide 3.
      
 0.595
S4R6Q9_PETMA
Molybdenum cofactor synthesis 1.
      
 0.582
LEPROT
Leptin receptor overlapping transcript.
      
 0.521
S4RMK2_PETMA
Uncharacterized protein.
    
 0.504
S4RVX9_PETMA
WD repeat domain 90.
    
 0.504
SLC1A2
Amino acid transporter.
   
  
 0.501
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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