STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R913_PETMAUncharacterized protein. (246 aa)    
Predicted Functional Partners:
S4RJR5_PETMA
Uncharacterized protein.
 
  
  0.955
S4RNG8_PETMA
Uncharacterized protein.
 
  
  0.955
S4RXZ3_PETMA
Uncharacterized protein.
 
 
  0.955
S4RTX1_PETMA
Uncharacterized protein.
 
     0.949
S4RDK9_PETMA
Uncharacterized protein.
 
  
  0.939
S4R8Z4_PETMA
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
  
  0.933
S4RUF7_PETMA
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
      0.900
S4RTC9_PETMA
Uncharacterized protein.
 
     0.857
S4RZV9_PETMA
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
   
  0.815
S4R5Z2_PETMA
Syntaxin 1A (brain).
    
 0.814
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.