Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R921_PETMATransmembrane protein 161B. (508 aa)    
Predicted Functional Partners:
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.721
S4RBH0_PETMA
Mannosyltransferase.
      
 0.678
S4R7K6_PETMA
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.671
S4RMU5_PETMA
CWC22 spliceosome associated protein homolog.
      
 0.666
S4R8X8_PETMA
Cysteine-rich with EGF-like domains 2.
   
  
 0.660
S4RQ88_PETMA
Uncharacterized protein.
      
 0.651
S4R873_PETMA
Uncharacterized protein.
      
 0.645
S4RSJ9_PETMA
Thioredoxin domain-containing protein.
      
 0.639
S4RQ04_PETMA
Membrane magnesium transporter 1.
      
 0.630
S4RM75_PETMA
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
   
  
 0.627
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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