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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R925_PETMAUncharacterized protein. (322 aa)    
Predicted Functional Partners:
S4RSJ4_PETMA
Uncharacterized protein.
  
 0.905
S4RC57_PETMA
G protein-coupled receptor 143.
  
 0.896
S4RG77_PETMA
Amidohydro-rel domain-containing protein.
  
 0.896
S4RRL4_PETMA
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.894
S4RIQ1_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 
 0.795
S4RLN8_PETMA
FAD-binding FR-type domain-containing protein.
  
 
 0.795
S4R8A4_PETMA
Oxidoreductase NAD-binding domain containing 1.
  
 
 0.789
S4RM45_PETMA
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 
 0.789
S4RB85_PETMA
Uncharacterized protein.
  
 
 0.782
S4RF99_PETMA
Aminoadipate aminotransferase.
   
 0.733
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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