Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R935_PETMALeucine rich repeat containing 8 VRAC subunit Db. (501 aa)    
Predicted Functional Partners:
S4RE09_PETMA
Leucine rich repeat containing 8 VRAC subunit Ab.
   
  0.988
S4RCG2_PETMA
Zgc:66426.
    
 0.509
S4R5Z1_PETMA
Uncharacterized protein.
  
 
  0.499
S4RD82_PETMA
IG domain-containing protein.
  
 
   0.491
S4RIU2_PETMA
Uncharacterized protein.
  
 
  0.486
S4R7H6_PETMA
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
  
     0.471
S4RBL7_PETMA
Neurexophilin 2b.
  
     0.465
S4RR78_PETMA
Solute carrier family 12 member 4.
      
 0.459
S4RSY0_PETMA
Protein tweety homolog; Probable chloride channel.
      
 0.458
S4RV84_PETMA
L-type lectin-like domain-containing protein.
      
 0.458
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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