Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R938_PETMAUncharacterized protein. (285 aa)    
Predicted Functional Partners:
FIBB_PETMA
Fibrinogen beta chain; Fibrinogen has a double function: yielding monomers that polymerize into fibrin and acting as a cofactor in platelet aggregation.
   
 0.987
FIBA2_PETMA
Fibrinogen alpha-2 chain; Fibrinogen has a double function: yielding monomers that polymerize into fibrin and acting as a cofactor in platelet aggregation.
   
 0.951
FIBA1_PETMA
Fibrinogen alpha-1 chain; Fibrinogen has a double function: yielding monomers that polymerize into fibrin and acting as a cofactor in platelet aggregation.
   
 0.951
FGG
Fibrinogen gamma chain; Together with fibrinogen alpha (FGA) and fibrinogen beta (FGB), polymerizes to form an insoluble fibrin matrix. Has a major function in hemostasis as one of the primary components of blood clots.
   
 0.949
S4RH70_PETMA
DUF1081 domain-containing protein.
   
 0.904
S4REY0_PETMA
Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.
   
  
 0.854
S4R497_PETMA
Uncharacterized protein.
    
 0.844
S4RAH6_PETMA
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
    
 0.783
S4RX62_PETMA
Aminotran_5 domain-containing protein.
   
    0.774
S4RSA5_PETMA
Uncharacterized protein.
   
 0.754
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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