Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R946_PETMAUncharacterized protein. (535 aa)    
Predicted Functional Partners:
S4RAY5_PETMA
Uncharacterized protein.
 
  
  0.926
S4RBP2_PETMA
Protein tyrosine phosphatase receptor type Sa.
 
  
  0.735
S4RPI8_PETMA
Uncharacterized protein.
 
  
  0.698
S4RJH8_PETMA
Uncharacterized protein.
 
      0.670
S4RTE0_PETMA
Angiomotin.
     
 0.669
S4RMS1_PETMA
Uncharacterized protein.
      
 0.646
S4RWA6_PETMA
Tyrosine-protein phosphatase domain-containing protein.
 
  
  0.633
ARPP19
cAMP regulated phosphoprotein 19; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.
      
 0.626
AP3B2
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.614
S4RMG2_PETMA
Receptor-type tyrosine-protein phosphatase.
 
  
  0.596
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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