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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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[Homology]
Score
S4R948_PETMATyrosyl-DNA phosphodiesterase 2b. (275 aa)    
Predicted Functional Partners:
S4RNM2_PETMA
Tyrosyl-DNA phosphodiesterase 1.
   
  
 0.904
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
   0.878
UBB
Ubiquitin B.
    
   0.819
S4RLU0_PETMA
Acyl-CoA thioesterase 13.
      
 0.779
S4RQP6_PETMA
C2H2-type domain-containing protein.
      
 0.722
S4R6G0_PETMA
SprT-like domain-containing protein.
      
 0.699
S4RKI1_PETMA
X-ray repair complementing defective repair in Chinese hamster cells 6.
     
 0.696
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.685
S4RKW4_PETMA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]
      
 0.673
S4RK95_PETMA
DNA ligase.
      
 0.670
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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