Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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[Homology]
Score
S4R958_PETMAPhenylalanyl-tRNA synthetase 2, mitochondrial. (419 aa)    
Predicted Functional Partners:
S4RVU4_PETMA
Phenylalanyl-tRNA synthetase subunit alpha.
   
 
 0.924
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
  
 0.915
S4R862_PETMA
Zinc finger CCHC-type and RNA binding motif 1.
    
   0.895
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
  
 0.839
S4R4M7_PETMA
Uncharacterized protein.
  
  
 0.839
S4RN99_PETMA
Pumilio RNA-binding family member 1.
    
   0.812
S4RRG2_PETMA
Pumilio RNA-binding family member 2.
    
   0.812
S4RXW2_PETMA
Prolyl-tRNA synthetase 2, mitochondrial.
   
  
 0.812
S4RC38_PETMA
Tyrosine--tRNA ligase.
  
  
 0.800
S4RA74_PETMA
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.790
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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