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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R960_PETMANIMA-related kinase 8. (605 aa)    
Predicted Functional Partners:
S4RWR3_PETMA
Inversin.
    
 
 0.531
S4RYI2_PETMA
Serine/threonine-protein kinase PLK.
   
0.510
S4RC79_PETMA
Protein kinase domain-containing protein.
   
0.498
S4RZR2_PETMA
Protein kinase domain-containing protein.
   
0.498
S4RHF3_PETMA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.488
RANBP2
RAN binding protein 2.
    
  0.488
S4RMR5_PETMA
CENP-F_N domain-containing protein.
   
 0.442
S4RLA4_PETMA
Diacylglycerol kinase.
   
  0.412
S4RV13_PETMA
SAM domain-containing protein.
   
  0.412
S4RNB0_PETMA
Ceramide kinase-like.
    
  0.411
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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