Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAP25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (164 aa)    
Predicted Functional Partners:
S4R5Z2_PETMA
Syntaxin 1A (brain).
   
 0.982
S4RTF1_PETMA
V-SNARE coiled-coil homology domain-containing protein.
   
 0.957
S4RBN3_PETMA
Syntaxin 11b, tandem duplicate 2; Belongs to the syntaxin family.
   
 0.923
S4R9K5_PETMA
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.919
S4RFZ8_PETMA
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.896
NAPA
Uncharacterized protein.
   
 0.871
NAPA-2
Uncharacterized protein.
   
 0.871
S4RTR2_PETMA
t-SNARE coiled-coil homology domain-containing protein.
    
 0.859
S4RDH0_PETMA
C2 domain-containing protein.
   
 0.857
SYT5
Synaptotagmin 5.
   
 0.857
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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