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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R970_PETMAUncharacterized protein. (380 aa)    
Predicted Functional Partners:
S4RG88_PETMA
Uncharacterized protein.
 
     0.950
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
    
 0.711
S4RVS6_PETMA
TNF receptor-associated factor 7.
    
 0.673
S4RDH8_PETMA
Enoyl-CoA delta isomerase 2.
    
  0.611
S4RRA2_PETMA
Enoyl-CoA delta isomerase 2.
    
  0.611
S4RKI6_PETMA
Intraflagellar transport 88 homolog.
    
 0.590
S4RR10_PETMA
Zinc finger, AN1-type domain 4.
   
 0.590
S4RAS9_PETMA
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.586
S4RWD7_PETMA
Uncharacterized protein.
    
 0.580
S4RZP3_PETMA
RING-type domain-containing protein.
    
 0.579
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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