Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R978_PETMAMidkine b. (147 aa)    
Predicted Functional Partners:
S4RKR8_PETMA
Leukocyte receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.981
S4RTP9_PETMA
Dipeptidyl-peptidase 7.
      
 0.717
S4RUA8_PETMA
Spermatogenesis associated 20.
      
 0.699
S4RJF2_PETMA
Sema domain-containing protein.
    
 0.659
S4RWV5_PETMA
Protein kinase domain-containing protein.
    
 0.659
S4R5D1_PETMA
Cathepsin Bb; Belongs to the peptidase C1 family.
      
 0.645
S4RNX7_PETMA
Uncharacterized protein.
    
 0.628
S4RST9_PETMA
Protein tyrosine phosphatase receptor type Ga.
    
 0.628
S4R4S7_PETMA
GATA binding protein 4.
      
 0.612
S4RNN1_PETMA
Uncharacterized protein.
      
 0.610
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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