Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
S4R979_PETMAZgc:66475. (481 aa)    
Predicted Functional Partners:
S4RXG6_PETMA
Timeless circadian clock.
    
 0.940
S4RL68_PETMA
Uncharacterized protein.
    
 0.741
SODM_PETMA
Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
  
 
 0.677
S4RQ78_PETMA
3-hydroxyisobutyrate dehydrogenase b.
    
 
 0.657
S4R5U4_PETMA
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.649
S4RG80_PETMA
VRK serine/threonine kinase 1.
   
 0.629
S4RI75_PETMA
Protein kinase domain-containing protein.
    
 0.628
S4RT99_PETMA
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
 0.628
S4RHX4_PETMA
Cullin 1b; Belongs to the cullin family.
    
 0.607
ASF1A
Anti-silencing function 1A histone chaperone.
   
    0.595
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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