STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R981_PETMAUncharacterized protein. (167 aa)    
Predicted Functional Partners:
S4RCX6_PETMA
Cullin 2; Belongs to the cullin family.
    
 
 0.680
S4RTH7_PETMA
Elongin C paralog a; Belongs to the SKP1 family.
    
   0.645
S4RMF7_PETMA
UBX domain protein 7.
    
   0.620
S4S017_PETMA
Uncharacterized protein.
 
    
 0.586
S4RTU3_PETMA
Male-enhanced antigen 1.
      
 0.481
S4R5I8_PETMA
Spermatogenesis associated 4.
      
 0.475
S4RFB6_PETMA
Zinc finger, MYND-type containing 10.
      
 0.416
S4R8B4_PETMA
Mitochondrial ribosomal protein L2.
   
  
 0.412
S4RPZ3_PETMA
Transmembrane protein 265.
      
 0.400
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.