Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R982_PETMATrio Rho guanine nucleotide exchange factor. (1494 aa)    
Predicted Functional Partners:
S4RVI0_PETMA
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
  
  0.927
S4RF79_PETMA
Uncharacterized protein.
    
 0.837
S4RQ50_PETMA
Rac family small GTPase 2.
    
 0.837
S4RX54_PETMA
Rac family small GTPase 1.
    
 0.837
S4RFJ8_PETMA
Protein kinase domain-containing protein.
 
  
 0.829
S4RC47_PETMA
Uncharacterized protein.
    
 
 0.826
S4R4S5_PETMA
Rho related BTB domain containing 1.
    
 0.825
S4RTZ9_PETMA
BTB domain-containing protein.
    
 0.825
S4RU45_PETMA
Rho related BTB domain containing 4.
    
 0.825
S4S054_PETMA
Protein kinase domain-containing protein.
 
  
  0.822
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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