STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R982_PETMATrio Rho guanine nucleotide exchange factor. (1494 aa)    
Predicted Functional Partners:
NPSR
Neuropeptide S receptor.
    
 0.981
S4RVI0_PETMA
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
  
   0.908
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
   
 0.839
S4RFJ8_PETMA
Protein kinase domain-containing protein.
 
  
 
 0.819
S4S054_PETMA
Protein kinase domain-containing protein.
 
  
   0.797
S4S055_PETMA
Protein kinase domain-containing protein.
 
  
   0.793
S4RF79_PETMA
Uncharacterized protein.
   
 0.787
S4RQ50_PETMA
Rac family small GTPase 2.
   
 0.787
S4RX54_PETMA
Rac family small GTPase 1.
   
 0.787
S4RCG0_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.781
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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