Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
S4R988_PETMAFH2 domain-containing protein. (247 aa)    
Predicted Functional Partners:
S4S030_PETMA
Diaphanous-related formin 2.
 
     0.922
S4RED6_PETMA
Uncharacterized protein.
    
 
 0.564
S4RXE9_PETMA
Uncharacterized protein.
    
 
 0.564
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
   
    0.506
S4RIP9_PETMA
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
    0.492
S4RHY4_PETMA
Rhophilin, Rho GTPase binding protein 1.
 
  
  0.464
S4R4S5_PETMA
Rho related BTB domain containing 1.
   
 0.461
RHOC
Ras homolog family member C.
   
 0.461
S4R9E7_PETMA
Uncharacterized protein.
   
 0.461
S4RAG4_PETMA
Uncharacterized protein.
   
 0.461
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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