Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R989_PETMAUncharacterized protein. (364 aa)    
Predicted Functional Partners:
S4RED2_PETMA
Upregulator of cell proliferation.
 
    0.712
S4S0E8_PETMA
VLIG-type G domain-containing protein.
 
    0.701
CENPS-CORT
CENPS-CORT readthrough.
    
 0.700
S4RM28_PETMA
VLIG-type G domain-containing protein.
 
    0.670
S4RZS6_PETMA
VLIG-type G domain-containing protein.
 
    0.630
S4RDE2_PETMA
Helicase ATP-binding domain-containing protein.
    
 0.628
S4REK3_PETMA
Helicase ATP-binding domain-containing protein.
    
 0.628
FANCM
Uncharacterized protein.
    
 0.628
S4R805_PETMA
MUS81 structure-specific endonuclease subunit.
    
 0.598
S4RA10_PETMA
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.593
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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