STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R990_PETMARNA binding motif protein 34. (374 aa)    
Predicted Functional Partners:
S4RDD2_PETMA
RRM domain-containing protein.
   
 
 0.992
S4RT04_PETMA
Helicase C-terminal domain-containing protein.
   
 0.991
S4RR36_PETMA
Spb1_C domain-containing protein.
   
 
 0.990
S4RGY9_PETMA
Brix domain containing 2.
   
 
 0.987
S4RH56_PETMA
Uncharacterized protein.
   
 
 0.986
S4R6V7_PETMA
WD repeat domain 74.
   
 
 0.983
S4RDX2_PETMA
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.
   
 0.976
S4R5Y2_PETMA
Helicase C-terminal domain-containing protein.
   
 0.971
S4R581_PETMA
TRAUB domain-containing protein.
   
  
 0.970
S4R6V5_PETMA
Proliferation-associated 2G4, b.
   
 
 0.962
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.