STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLR3Toll like receptor 3; Belongs to the Toll-like receptor family. (908 aa)    
Predicted Functional Partners:
S4R6J6_PETMA
MYD88 innate immune signal transduction adaptor.
    
 0.953
S4RQU5_PETMA
G_PROTEIN_RECEP_F2_4 domain-containing protein.
   
   0.919
ADGRL2
Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.
   
   0.919
S4RIK9_PETMA
Transmembrane p24 trafficking protein 7.
    
 0.883
S4RTT6_PETMA
Transmembrane p24 trafficking protein 3.
    
 0.883
UNC93B1
Unc-93 homolog B1, TLR signaling regulator.
    
 0.849
S4RK02_PETMA
Uncharacterized protein.
    
 0.848
S4RLW1_PETMA
Ig-like domain-containing protein.
    
 0.848
S4RMR7_PETMA
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.832
S4R4V7_PETMA
Interleukin-1 receptor-associated kinase 4.
    
 0.797
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.