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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R997_PETMARing finger protein 41. (317 aa)    
Predicted Functional Partners:
S4RSL6_PETMA
Ubiquitin carboxyl-terminal hydrolase.
    
 0.991
S4REI3_PETMA
Baculoviral IAP repeat containing 6.
    
 0.912
S4RTC7_PETMA
Uncharacterized protein.
    
 0.896
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
 0.859
S4RK87_PETMA
E3 ubiquitin-protein ligase.
    
 0.857
S4R4A4_PETMA
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.853
S4RP38_PETMA
Ubiquitin specific peptidase 2b; Belongs to the peptidase C19 family.
    
 0.853
S4RCA3_PETMA
E3 ubiquitin-protein ligase.
    
 0.851
S4RMR7_PETMA
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
0.847
S4R6P1_PETMA
Cbl-PTB domain-containing protein.
    
 0.844
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.