Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9A1_PETMAUncharacterized protein. (156 aa)    
Predicted Functional Partners:
S4RZB8_PETMA
Uncharacterized protein.
    
   0.903
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
     
 0.797
S4RH70_PETMA
DUF1081 domain-containing protein.
      
 0.695
S4R5S1_PETMA
Transmembrane p24 trafficking protein 6.
   
  
 0.628
S4R793_PETMA
Tissue factor pathway inhibitor 2.
      
 0.609
DNASE1L3
Deoxyribonuclease; Belongs to the DNase I family.
   
    0.605
DNASE1
Deoxyribonuclease 1.
   
    0.605
S4RE31_PETMA
Deoxyribonuclease; Belongs to the DNase I family.
   
    0.605
S4RN95_PETMA
Uncharacterized protein.
      
 0.593
S4RJS9_PETMA
PA2c domain-containing protein.
     
 0.546
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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