Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R9A2_PETMAVWFA domain-containing protein. (519 aa)    
Predicted Functional Partners:
S4RJ94_PETMA
Uncharacterized protein.
   
 0.988
S4RA67_PETMA
Integrator complex subunit 13.
    
 0.987
S4RR79_PETMA
Integrator complex subunit 5.
    
 0.987
S4RN27_PETMA
Integrator complex subunit 9.
  
 0.976
S4RW18_PETMA
DUF3677 domain-containing protein.
    
 0.966
S4RW63_PETMA
Uncharacterized protein.
    
 0.966
S4RMG8_PETMA
Lactamase_B domain-containing protein.
  
 0.958
S4RBI7_PETMA
Uncharacterized protein.
    
 0.949
S4RDL1_PETMA
Integrator complex subunit 12.
    
 0.927
S4RIJ8_PETMA
Uncharacterized protein.
    
 0.912
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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