Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9B5_PETMAGlucuronic acid epimerase a. (603 aa)    
Predicted Functional Partners:
S4RVY5_PETMA
HSNSD domain-containing protein.
   
 0.952
S4RLT0_PETMA
Syndecan domain-containing protein.
    
 0.735
S4RSY8_PETMA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.735
S4S065_PETMA
Heparan sulfate 2-O-sulfotransferase 1b.
   
 
 0.735
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.689
S4RSY4_PETMA
Solute carrier family 35 member B3.
      
 0.686
S4RWP0_PETMA
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.669
S4RR65_PETMA
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.667
S4RN04_PETMA
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.647
S4RAW4_PETMA
Progestin and adipoQ receptor family member Va.
      
 0.614
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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