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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9B7_PETMASolute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family. (339 aa)    
Predicted Functional Partners:
SUCLA2
ATP-grasp domain-containing protein.
     
 0.820
S4R5F8_PETMA
Argininosuccinate lyase.
     
 0.807
S4RNM4_PETMA
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.792
S4RKF9_PETMA
Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
     
 0.769
S4RXU8_PETMA
Uncharacterized protein.
     
 0.769
S4RWR0_PETMA
Ribosomal protein L8.
   
 
 0.748
S4R9M4_PETMA
Aspartate aminotransferase.
   
 
  0.742
S4RAC1_PETMA
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.718
S4RWA2_PETMA
Ribosomal protein L28.
   
   0.718
S4RTQ6_PETMA
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.716
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.