Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9B8_PETMAWD_REPEATS_REGION domain-containing protein. (328 aa)    
Predicted Functional Partners:
S4RMM3_PETMA
DEP domain containing MTOR-interacting protein.
    
 0.998
AKT1S1
AKT1 substrate 1.
   
 0.998
S4RLA7_PETMA
Ras-related GTP binding D.
    
 0.996
S4RKN5_PETMA
ATG13 autophagy related 13 homolog (S. cerevisiae).
    
 0.994
S4RY79_PETMA
SIN1_PH domain-containing protein.
    
 0.987
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 0.983
S4R5X8_PETMA
Ras homolog, mTORC1 binding.
    
 0.977
S4RYE8_PETMA
Ras homolog, mTORC1 binding like 1.
    
 0.977
S4RIX5_PETMA
CRIM domain-containing protein.
    
 0.973
S4RJ00_PETMA
SIN1 domain-containing protein.
    
 0.973
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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