Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9C3_PETMAUncharacterized protein. (247 aa)    
Predicted Functional Partners:
S4S071_PETMA
Poly-U binding splicing factor b.
   
 
 0.750
S4RTA2_PETMA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  0.587
S4RVW8_PETMA
Small nuclear ribonucleoprotein 70 (U1).
   
 
 0.574
S4R881_PETMA
Exosome component 2.
   
  0.524
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H1.
   
 
 0.493
S4RBH3_PETMA
Uncharacterized protein.
   
  0.488
KHDRBS3
KH RNA binding domain containing, signal transduction associated 3.
   
 
 0.459
S4RFN9_PETMA
KH domain containing, RNA binding, signal transduction associated 2.
   
 
 0.459
S4RIJ1_PETMA
KH domain containing, RNA binding, signal transduction associated 1a.
   
 
 0.459
S4RV90_PETMA
Splicing factor 1.
   
 
 0.427
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.