Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9C4_PETMAUncharacterized protein. (288 aa)    
Predicted Functional Partners:
S4RDW1_PETMA
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
 
 
 0.996
S4RE68_PETMA
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.989
PRKAR2B
Protein kinase cAMP-dependent type II regulatory subunit beta.
 
 
 0.986
S4RIH5_PETMA
Cyclic nucleotide-binding domain-containing protein.
   
 0.985
S4RND8_PETMA
Protein kinase cAMP-dependent type I regulatory subunit alpha.
   
 0.985
S4RED5_PETMA
Uncharacterized protein.
    
 0.976
S4RF53_PETMA
Uncharacterized protein.
    
 0.970
S4RTN4_PETMA
Uncharacterized protein.
    
 0.970
S4REI7_PETMA
Ion_trans domain-containing protein.
    
 0.969
S4RR27_PETMA
Voltage-dependent L-type calcium channel 1c.
    
 0.969
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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