STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9C6_PETMADDE_Tnp_1_7 domain-containing protein. (536 aa)    
Predicted Functional Partners:
S4RIQ1_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.828
S4RLN8_PETMA
FAD-binding FR-type domain-containing protein.
  
 0.828
S4RWU1_PETMA
Replication protein A2.
   
  0.706
S4RHC9_PETMA
3-oxoacyl-ACP synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.676
S4RLD8_PETMA
Aminoadipate-semialdehyde dehydrogenase.
  
 0.653
S4RMT0_PETMA
Protein kinase domain-containing protein.
    
  0.640
S4R5M7_PETMA
Coiled-coil domain containing 57.
   
 0.639
S4R5V2_PETMA
Uncharacterized protein.
   
 0.639
S4RKC9_PETMA
Tyrosine-protein kinase.
   
 0.637
S4RUM8_PETMA
Protein kinase domain-containing protein.
   
  0.629
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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