Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
USP15Ubiquitin specific peptidase 15; Belongs to the peptidase C19 family. (754 aa)    
Predicted Functional Partners:
S4RMR7_PETMA
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.923
UBB
Ubiquitin B.
    
 0.910
S4RHF9_PETMA
Ubiquitin carboxyl-terminal hydrolase.
  
  
0.903
RHOT2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.902
S4RTY4_PETMA
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.902
S4RM11_PETMA
Ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase); Belongs to the peptidase C19 family.
    
 
 0.894
S4RLS4_PETMA
PRP3 pre-mRNA processing factor 3 homolog (yeast).
   
 
 0.840
S4S029_PETMA
USP domain-containing protein; Belongs to the peptidase C19 family.
 
      0.819
S4RS66_PETMA
TNF receptor-associated factor.
    
  0.762
S4RGQ0_PETMA
Proteasome 26S subunit, non-ATPase 14.
    
 
 0.743
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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