Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9E1_PETMAV-myb avian myeloblastosis viral oncogene homolog-like 1. (707 aa)    
Predicted Functional Partners:
S4RF08_PETMA
Lin-52 DREAM MuvB core complex component.
    
 0.991
S4R9I9_PETMA
Lin-37 DREAM MuvB core complex component.
    
 0.988
S4RAF0_PETMA
Lin-54 DREAM MuvB core complex component.
    
 0.958
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
    
 0.936
S4RN58_PETMA
Retinoblastoma-like 1 (p107).
    
 0.908
S4R5R2_PETMA
E2F_TDP domain-containing protein.
   
 0.814
S4R6W3_PETMA
E2F_TDP domain-containing protein.
   
 0.814
S4RRB0_PETMA
Mitochondrial ribosomal protein S18A.
    
   0.811
S4RBS3_PETMA
Mitochondrial ribosomal protein L15.
    
 
 0.803
S4RTC6_PETMA
Mitochondrial ribosomal protein L4.
    
 
 0.789
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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