STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9E1_PETMAV-myb avian myeloblastosis viral oncogene homolog-like 1. (707 aa)    
Predicted Functional Partners:
S4RF08_PETMA
Lin-52 DREAM MuvB core complex component.
    
 0.974
S4R9I9_PETMA
Lin-37 DREAM MuvB core complex component.
   
 0.967
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 0.958
S4RAF0_PETMA
Lin-54 DREAM MuvB core complex component.
    
 0.956
S4R8K0_PETMA
Cyclin A1; Belongs to the cyclin family.
  
 0.874
S4R6I0_PETMA
Uncharacterized protein; Belongs to the cyclin family.
   
 0.823
S4R7T1_PETMA
Uncharacterized protein.
   
 0.785
S4RFX2_PETMA
Integrase catalytic domain-containing protein.
   
 0.785
S4RWZ6_PETMA
Integrase catalytic domain-containing protein.
   
 0.785
CCNF
Cyclin F; Belongs to the cyclin family.
   
 0.766
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.