Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R9E3_PETMAUncharacterized protein. (1156 aa)    
Predicted Functional Partners:
S4RQ89_PETMA
PH domain-containing protein.
 
     0.943
S4RST4_PETMA
Adducin 1 (alpha).
    
 
 0.724
S4R4L6_PETMA
Uncharacterized protein.
 
  
  0.576
S4RMQ9_PETMA
Actin related protein 10; Belongs to the actin family.
    
 0.568
S4R5U4_PETMA
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
   0.542
S4R682_PETMA
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.530
S4R4G4_PETMA
ANK_REP_REGION domain-containing protein.
   
 0.529
S4RMR6_PETMA
Uncharacterized protein.
   
 0.529
S4RQ14_PETMA
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
   
 0.529
S4RQC6_PETMA
Uncharacterized protein.
   
 0.529
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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