STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9E4_PETMAEmbryonic ectoderm development. (319 aa)    
Predicted Functional Partners:
S4RI70_PETMA
Uncharacterized protein.
    
 0.999
S4RZ66_PETMA
SUZ12 polycomb repressive complex 2 subunit a.
   
 0.998
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 0.993
S4R9H0_PETMA
Jumonji, AT rich interactive domain 2a.
    
 0.991
S4RH73_PETMA
SET domain containing 7, histone lysine methyltransferase.
    
 0.983
S4R5U8_PETMA
PHD finger protein 1.
   
 0.982
S4RDL1_PETMA
Integrator complex subunit 12.
   
 0.907
S4RDL6_PETMA
Uncharacterized protein.
    
 0.858
S4RKK6_PETMA
PHD-type domain-containing protein.
    
 0.858
S4RQQ0_PETMA
Uncharacterized protein.
    
 0.858
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.