Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9E7_PETMAUncharacterized protein. (199 aa)    
Predicted Functional Partners:
S4RK02_PETMA
Uncharacterized protein.
    
 0.866
S4RLW1_PETMA
Ig-like domain-containing protein.
    
 0.866
ARHGEF11
Rho guanine nucleotide exchange factor 11.
   
 0.853
S4RR09_PETMA
Uncharacterized protein.
    
 0.839
S4R4C9_PETMA
DH domain-containing protein.
    
 0.756
S4R982_PETMA
Trio Rho guanine nucleotide exchange factor.
    
 0.756
S4RK73_PETMA
Rho guanine nucleotide exchange factor (GEF) 25b.
    
 0.756
S4RVI0_PETMA
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.756
S4RVU5_PETMA
Trio Rho guanine nucleotide exchange factor.
    
 0.756
RTKN2
Rhotekin 2.
    
 0.709
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.