Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9E9_PETMAANK_REP_REGION domain-containing protein. (178 aa)    
Predicted Functional Partners:
S4RXD2_PETMA
Uncharacterized protein.
 
     0.923
S4RGY4_PETMA
Uncharacterized protein.
 
      0.900
S4RMK7_PETMA
Uncharacterized protein.
 
      0.861
S4RMH9_PETMA
Uncharacterized protein.
 
     0.859
S4RF63_PETMA
Uncharacterized protein.
    
  0.464
S4RT26_PETMA
Uncharacterized protein.
    
  0.464
UNC-5
Netrin receptor unc-5 homolog; Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding (By similarity).
    
  0.464
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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