Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9F0_PETMADimer_Tnp_hAT domain-containing protein. (505 aa)    
Predicted Functional Partners:
S4R9J7_PETMA
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.644
S4R953_PETMA
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.561
S4RTX7_PETMA
Uncharacterized protein.
    
  0.500
S4RIY0_PETMA
CHDNT domain-containing protein.
    
  0.462
SLC34A3
Solute carrier family 34 member 3.
    
 
 0.461
S4RBE0_PETMA
ADP-ribosylation factor GTPase activating protein 2.
      
 0.458
S4RGT7_PETMA
E2F transcription factor 3.
    
 
 0.411
S4S199_PETMA
Fem-1 homolog c (C. elegans).
    
 
 0.405
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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