Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9F4_PETMASwitching B cell complex subunit SWAP70b. (375 aa)    
Predicted Functional Partners:
S4RD47_PETMA
Uncharacterized protein.
    
   0.696
S4RST0_PETMA
BRISC and BRCA1 A complex member 2.
    
   0.696
S4RE28_PETMA
Uncharacterized protein.
    
   0.667
S4R6W1_PETMA
Uncharacterized protein.
   
 0.574
S4RJF2_PETMA
Sema domain-containing protein.
    
  0.546
S4RWV5_PETMA
Protein kinase domain-containing protein.
    
  0.546
TMEM19
Transmembrane protein 19.
      
 0.460
S4RE97_PETMA
Uncharacterized protein.
     
 0.431
S4RF79_PETMA
Uncharacterized protein.
   
  0.424
S4RQ50_PETMA
Rac family small GTPase 2.
   
  0.424
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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