Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9F6_PETMAUncharacterized protein. (339 aa)    
Predicted Functional Partners:
S4RS29_PETMA
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
 
    
 0.914
S4RJ37_PETMA
Serine/threonine-protein phosphatase.
    
 0.899
S4RPA4_PETMA
ANK_REP_REGION domain-containing protein.
      
 0.750
S4RFX0_PETMA
Partner of NOB1 homolog.
   
  
 0.726
S4RSE5_PETMA
Flavodoxin-like domain-containing protein.
   
  
 0.668
S4R5L2_PETMA
RNA pseudouridine synthase domain containing 2.
      
 0.653
S4R7C4_PETMA
RNA pseudouridine synthase domain containing 2.
      
 0.653
S4RTL9_PETMA
TYW3 domain-containing protein.
   
  
 0.637
S4RR22_PETMA
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.635
S4RHG0_PETMA
VPS18 core subunit of CORVET and HOPS complexes.
   
  
 0.631
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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