Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R9F8_PETMAMembrane-bound transcription factor peptidase, site 1. (907 aa)    
Predicted Functional Partners:
ATF6B
Activating transcription factor 6 beta.
     
 0.983
S4RQ06_PETMA
Uncharacterized protein.
   
 
 0.979
S4RVH4_PETMA
Zgc:110063.
    
 
 0.957
S4RG30_PETMA
Peptidase_M50 domain-containing protein.
  
  
 0.861
S4R8N0_PETMA
Sterol regulatory element binding transcription factor 2.
    
 0.824
S4RYM6_PETMA
BHLH domain-containing protein.
    
 0.824
S4RDS7_PETMA
BZIP domain-containing protein.
    
 0.755
CREB3L4
cAMP responsive element binding protein 3 like 4.
    
 0.755
S4RZN2_PETMA
cAMP responsive element binding protein 3-like 2.
    
 0.729
S4RKV2_PETMA
SIL1 nucleotide exchange factor.
   
 
 0.673
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.