Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R9G2_PETMAUncharacterized protein. (298 aa)    
Predicted Functional Partners:
S4RS27_PETMA
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.463
S4R5U5_PETMA
MACPF domain-containing protein.
  
     0.444
BRINP2
BMP/retinoic acid inducible neural specific 2.
  
     0.436
S4R978_PETMA
Midkine b.
  
     0.428
S4RRX2_PETMA
EpoR_lig-bind domain-containing protein.
  
     0.427
S4RAH6_PETMA
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
  
     0.425
S4R609_PETMA
B30.2/SPRY domain-containing protein.
  
     0.415
S4RBV8_PETMA
B30.2/SPRY domain-containing protein.
  
     0.411
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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