Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9G9_PETMAMeis_PKNOX_N domain-containing protein. (133 aa)    
Predicted Functional Partners:
S4RIK6_PETMA
Homeobox domain-containing protein.
    
 0.906
S4S1N8_PETMA
Homeobox protein engrailed-like.
    
 
 0.875
S4RRJ7_PETMA
CULT domain-containing protein.
    
 
 0.764
S4S0A9_PETMA
Homeobox domain-containing protein.
    
 
 0.746
S4RM79_PETMA
Mab-21-like 2.
    
 
 0.744
S4S0A4_PETMA
Mab-21-like 1.
    
 
 0.744
S4RSV2_PETMA
Homeobox domain-containing protein.
    
 
 0.740
WWTR1
WW domain containing transcription regulator 1.
    
 0.739
S4RVF5_PETMA
WW domain-containing protein.
    
 0.739
S4RP97_PETMA
Uncharacterized protein.
    
 
 0.704
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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