Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SDSSerine dehydratase. (217 aa)    
Predicted Functional Partners:
S4RMK0_PETMA
Uncharacterized protein.
  
 
 0.974
S4RA84_PETMA
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.972
S4RNL3_PETMA
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.972
S4RTA1_PETMA
Beta_elim_lyase domain-containing protein.
  
 
 0.963
S4RX62_PETMA
Aminotran_5 domain-containing protein.
  
 
 0.947
S4R5S7_PETMA
L-threonine dehydrogenase.
   
 
 0.935
S4R9H3_PETMA
Cystathionase (cystathionine gamma-lyase), like.
  
 
 0.935
S4RWN3_PETMA
Phosphoserine phosphatase.
    
 0.924
S4RK94_PETMA
Serine dehydratase.
  
  
 
0.903
S4R576_PETMA
Reactive intermediate imine deaminase A homolog.
  
 0.874
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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