Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R9H4_PETMAPhosphodiesterase. (827 aa)    
Predicted Functional Partners:
S4RQL9_PETMA
Phosphodiesterase 10A.
  
 
0.957
PDE2A
Phosphodiesterase.
    
0.954
S4RF43_PETMA
Phosphodiesterase.
    
0.948
S4RTL5_PETMA
PDEase domain-containing protein.
    
 0.948
PDE1C
Phosphodiesterase.
    
0.948
S4R680_PETMA
Si:dkey-219c10.4.
    
0.941
A3RLS1_PETMA
Cone-like retinal photoreceptor cGMP-phosphodiesterase 6 gamma subunit.
     
 0.938
S4RI14_PETMA
Phosphodiesterase 6B, cGMP-specific, rod, beta.
  
 
 
0.934
S4RAT3_PETMA
Guanylate cyclase 1 soluble subunit beta 1; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.927
S4RY50_PETMA
Guanylate cyclase 1, soluble, beta 2; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.927
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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