STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R9H4_PETMAPhosphodiesterase. (827 aa)    
Predicted Functional Partners:
S4RAT3_PETMA
Guanylate cyclase 1 soluble subunit beta 1; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.889
S4RY50_PETMA
Guanylate cyclase 1, soluble, beta 2; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.889
S4R4B4_PETMA
Guanylate cyclase.
    
 0.880
S4RHX2_PETMA
Uncharacterized protein.
     
 0.876
S4RQL9_PETMA
Phosphodiesterase 10A.
  
 
0.873
S4RU37_PETMA
Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.872
S4R6M4_PETMA
Adenylate cyclase 2a; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.870
S4RR95_PETMA
Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.869
PDE2A
Phosphodiesterase.
    
0.863
S4R6F5_PETMA
Guanosine monophosphate reductase.
    
 0.852
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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